Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Gm26437-201ENSMUST00000082595 105 ntBASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ddx55Q6ZPL9 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm15719-201ENSMUST00000120619 635 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm14369-201ENSMUST00000121355 285 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm16571-201ENSMUST00000159112 291 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm29160-201ENSMUST00000190094 699 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm9710-201ENSMUST00000198053 499 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm21461-201ENSMUST00000200382 863 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm7780-201ENSMUST00000214787 406 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm18591-201ENSMUST00000220568 763 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm4012-201ENSMUST00000221504 581 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 AC154527.3-201ENSMUST00000225519 989 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr844-201ENSMUST00000054106 930 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Gm11885-201ENSMUST00000118473 1428 ntBASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx55Q6ZPL9 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm13998-201ENSMUST00000120952 335 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm26211-201ENSMUST00000158578 129 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm19840-201ENSMUST00000169624 882 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm28883-201ENSMUST00000189256 369 ntBASIC7.24□□□□□ -1.25
Ddx55Q6ZPL9 Gm28665-201ENSMUST00000189269 670 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms