Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ClpbQ60649 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ClpbQ60649 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.08□□□□□ -1.44
ClpbQ60649 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ClpbQ60649 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.08□□□□□ -1.44
ClpbQ60649 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
ClpbQ60649 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ClpbQ60649 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ClpbQ60649 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm11799-201ENSMUST00000116110 460 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm12937-201ENSMUST00000118333 448 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm14018-201ENSMUST00000119042 455 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm11341-201ENSMUST00000122316 447 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm18833-201ENSMUST00000173218 862 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm18595-201ENSMUST00000175736 1068 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm29072-201ENSMUST00000191149 678 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm9517-201ENSMUST00000195021 874 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm20239-201ENSMUST00000196610 982 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm7554-201ENSMUST00000202282 574 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.07□□□□□ -1.44
ClpbQ60649 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm18600-201ENSMUST00000207205 505 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.07□□□□□ -1.44
ClpbQ60649 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.07□□□□□ -1.44
ClpbQ60649 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ClpbQ60649 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm6990-201ENSMUST00000086830 348 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ClpbQ60649 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ClpbQ60649 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
ClpbQ60649 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.07□□□□□ -1.44
ClpbQ60649 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ClpbQ60649 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC6.07□□□□□ -1.44
ClpbQ60649 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ClpbQ60649 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
ClpbQ60649 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ClpbQ60649 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ClpbQ60649 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ClpbQ60649 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ClpbQ60649 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ClpbQ60649 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ClpbQ60649 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm26144-201ENSMUST00000104475 132 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm8250-201ENSMUST00000117398 774 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gm15765-201ENSMUST00000118407 910 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gm23884-201ENSMUST00000122687 294 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm25487-201ENSMUST00000158725 125 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.06□□□□□ -1.44
ClpbQ60649 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm37103-201ENSMUST00000191830 115 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.06□□□□□ -1.44
ClpbQ60649 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ClpbQ60649 Gm18445-201ENSMUST00000195502 774 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gm43655-201ENSMUST00000197367 222 ntBASIC6.06□□□□□ -1.44
ClpbQ60649 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms