Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm42643-201ENSMUST00000200504 279 ntBASIC5.7□□□□□ -1.5
Spg11Q3UHA3 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.7□□□□□ -1.5
Spg11Q3UHA3 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.7□□□□□ -1.5
Spg11Q3UHA3 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm15903-202ENSMUST00000199631 3518 ntBASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Spg11Q3UHA3 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm25292-201ENSMUST00000122797 322 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm17907-201ENSMUST00000173150 710 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm23631-201ENSMUST00000175291 123 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm37493-201ENSMUST00000193167 433 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm37962-201ENSMUST00000195535 2034 ntBASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.69□□□□□ -1.5
Spg11Q3UHA3 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms