Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.29□□□□□ -1.4
Sf3b6P59708 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.29□□□□□ -1.4
Sf3b6P59708 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sf3b6P59708 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sf3b6P59708 Malat1-201ENSMUST00000172812 6983 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.29□□□□□ -1.4
Sf3b6P59708 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sf3b6P59708 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm24373-201ENSMUST00000104393 132 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Mir190b-201ENSMUST00000104803 80 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm15094-201ENSMUST00000118394 1131 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm11972-201ENSMUST00000118514 389 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm11926-201ENSMUST00000118520 430 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm13930-201ENSMUST00000118569 368 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm13521-201ENSMUST00000118922 866 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm11928-201ENSMUST00000119323 437 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm23079-201ENSMUST00000157847 117 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm22687-201ENSMUST00000158301 105 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm24883-201ENSMUST00000158391 281 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm22670-201ENSMUST00000158724 143 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm23186-201ENSMUST00000180078 107 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm29197-201ENSMUST00000185922 702 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm38328-201ENSMUST00000195582 317 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm8925-201ENSMUST00000197212 763 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm43384-201ENSMUST00000200569 637 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm8921-201ENSMUST00000204306 649 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sf3b6P59708 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm8168-201ENSMUST00000209631 948 ntBASIC6.28□□□□□ -1.4
Sf3b6P59708 Gm45497-201ENSMUST00000211701 740 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms