Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Tpm1P58771 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm13183-201ENSMUST00000118615 789 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm13455-201ENSMUST00000118767 517 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm13626-201ENSMUST00000119435 402 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.68□□□□□ -1.34
Tpm1P58771 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.68□□□□□ -1.34
Tpm1P58771 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm20454-201ENSMUST00000172713 221 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.68□□□□□ -1.34
Tpm1P58771 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm37581-201ENSMUST00000192371 988 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm37439-201ENSMUST00000193150 856 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm42776-201ENSMUST00000198031 406 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm29736-201ENSMUST00000198189 385 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm5886-202ENSMUST00000203957 522 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm20136-201ENSMUST00000207501 891 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.68□□□□□ -1.34
Tpm1P58771 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.68□□□□□ -1.34
Tpm1P58771 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Tpm1P58771 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Tpm1P58771 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.68□□□□□ -1.34
Tpm1P58771 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Tpm1P58771 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Tpm1P58771 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
Tpm1P58771 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm23294-201ENSMUST00000104150 164 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.67□□□□□ -1.34
Tpm1P58771 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.67□□□□□ -1.34
Tpm1P58771 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm45626-201ENSMUST00000210093 361 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Gm4032-201ENSMUST00000210886 487 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.67□□□□□ -1.34
Tpm1P58771 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Tpm1P58771 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.67□□□□□ -1.34
Tpm1P58771 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tpm1P58771 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Tpm1P58771 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm11434-201ENSMUST00000122379 629 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.66□□□□□ -1.34
Tpm1P58771 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Tpm1P58771 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tpm1P58771 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tpm1P58771 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms