Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sox3P53784 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sox3P53784 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sox3P53784 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sox3P53784 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sox3P53784 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Gm13455-201ENSMUST00000118767 517 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm7212-201ENSMUST00000120817 348 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Gm22599-201ENSMUST00000157597 132 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm23995-201ENSMUST00000158060 129 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm3008-201ENSMUST00000160566 571 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm9597-201ENSMUST00000171913 602 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm6472-201ENSMUST00000178147 651 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.96□□□□□ -1.46
Sox3P53784 Mir7006-201ENSMUST00000183624 69 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm27152-201ENSMUST00000183828 99 ntBASIC5.96□□□□□ -1.46
Sox3P53784 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.96□□□□□ -1.46
Sox3P53784 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.96□□□□□ -1.46
Sox3P53784 Gm42886-201ENSMUST00000199214 466 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm44487-201ENSMUST00000205145 325 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm45122-201ENSMUST00000206376 784 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm45850-201ENSMUST00000212536 338 ntBASIC5.96□□□□□ -1.46
Sox3P53784 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.96□□□□□ -1.46
Sox3P53784 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm7570-201ENSMUST00000215246 698 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.96□□□□□ -1.46
Sox3P53784 Gm9535-201ENSMUST00000218499 768 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm19116-201ENSMUST00000218592 642 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm18601-201ENSMUST00000220831 634 ntBASIC5.96□□□□□ -1.46
Sox3P53784 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.96□□□□□ -1.46
Sox3P53784 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.96□□□□□ -1.46
Sox3P53784 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sox3P53784 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm5321-201ENSMUST00000072050 447 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sox3P53784 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Gm24454-201ENSMUST00000083349 132 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Gm7676-201ENSMUST00000084055 319 ntBASIC5.96□□□□□ -1.46
Sox3P53784 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sox3P53784 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Sox3P53784 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox3P53784 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox3P53784 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.95□□□□□ -1.46
Sox3P53784 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Sox3P53784 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.95□□□□□ -1.46
Sox3P53784 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox3P53784 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Sox3P53784 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox3P53784 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Sox3P53784 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Sox3P53784 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Sox3P53784 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Gm25445-201ENSMUST00000158996 299 ntBASIC5.95□□□□□ -1.46
Sox3P53784 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox3P53784 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Gm27355-201ENSMUST00000185045 128 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Gm18728-201ENSMUST00000186155 753 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox3P53784 Gm18839-201ENSMUST00000204292 670 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Gm46223-201ENSMUST00000215196 675 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox3P53784 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.95□□□□□ -1.46
Sox3P53784 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.95□□□□□ -1.46
Sox3P53784 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox3P53784 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox3P53784 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.95□□□□□ -1.46
Sox3P53784 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox3P53784 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.95□□□□□ -1.46
Sox3P53784 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox3P53784 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms