Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC7.24□□□□□ -1.25
Sox1P53783 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.24□□□□□ -1.25
Sox1P53783 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Gm33312-201ENSMUST00000222443 332 ntBASIC7.24□□□□□ -1.25
Sox1P53783 AC156803.1-201ENSMUST00000224407 820 ntBASIC7.24□□□□□ -1.25
Sox1P53783 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.24□□□□□ -1.25
Sox1P53783 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Sox1P53783 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Sox1P53783 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Sox1P53783 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Sox1P53783 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sox1P53783 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.24□□□□□ -1.25
Sox1P53783 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sox1P53783 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sox1P53783 Gm38374-201ENSMUST00000194417 2033 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.23□□□□□ -1.25
Sox1P53783 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Sox1P53783 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm37124-201ENSMUST00000192140 1992 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Ephx2-202ENSMUST00000224698 1985 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Sox1P53783 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Sox1P53783 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.23□□□□□ -1.25
Sox1P53783 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.23□□□□□ -1.25
Sox1P53783 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm11854-201ENSMUST00000117839 446 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm12994-201ENSMUST00000119601 447 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm13121-201ENSMUST00000120637 632 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm12103-201ENSMUST00000121892 362 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.23□□□□□ -1.25
Sox1P53783 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm10913-201ENSMUST00000133732 463 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm16139-201ENSMUST00000160015 420 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Sox1P53783 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Spanxn4-201ENSMUST00000172433 424 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Gm21758-201ENSMUST00000179336 819 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm26652-202ENSMUST00000181672 475 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.23□□□□□ -1.25
Sox1P53783 Gm27762-201ENSMUST00000183417 109 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm28597-201ENSMUST00000187664 666 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm29639-201ENSMUST00000188375 580 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm29647-201ENSMUST00000188795 666 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm28337-201ENSMUST00000190425 666 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm28504-201ENSMUST00000190977 666 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm31511-201ENSMUST00000193134 657 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm35843-201ENSMUST00000193716 666 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm38279-201ENSMUST00000194067 1131 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm43308-201ENSMUST00000197236 373 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm44023-201ENSMUST00000203710 469 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm44946-201ENSMUST00000208425 572 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Gm7333-201ENSMUST00000213449 1060 ntBASIC7.23□□□□□ -1.25
Sox1P53783 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm18252-203ENSMUST00000215855 757 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.23□□□□□ -1.25
Sox1P53783 AC153800.1-201ENSMUST00000219212 365 ntBASIC7.23□□□□□ -1.25
Sox1P53783 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.23□□□□□ -1.25
Sox1P53783 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Sox1P53783 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Sox1P53783 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sox1P53783 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Sox1P53783 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Sox1P53783 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.22□□□□□ -1.25
Sox1P53783 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Sox1P53783 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 314.9 ms