Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm13735-201ENSMUST00000120217 670 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm22701-201ENSMUST00000175371 291 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm4845-201ENSMUST00000179202 562 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm27866-201ENSMUST00000184459 171 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm29141-201ENSMUST00000190357 882 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm37770-201ENSMUST00000192855 772 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm17895-201ENSMUST00000194028 874 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm37838-201ENSMUST00000194464 312 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm43396-201ENSMUST00000197506 706 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm9985-201ENSMUST00000044101 510 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.1□□□□□ -1.59
Nkx2-1P50220 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Nkx2-1P50220 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm6142-201ENSMUST00000120290 325 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm12804-201ENSMUST00000121030 999 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm26321-201ENSMUST00000157740 242 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm24157-201ENSMUST00000175265 111 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Gm22990-201ENSMUST00000175427 89 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC5.09□□□□□ -1.59
Nkx2-1P50220 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms