Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm4234-201ENSMUST00000119747 714 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm7212-201ENSMUST00000120817 348 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm25374-201ENSMUST00000158158 101 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm20530-201ENSMUST00000174261 254 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm22548-201ENSMUST00000174899 78 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx3P48381 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Mir7046-201ENSMUST00000183435 66 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm7804-202ENSMUST00000194187 854 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx3P48381 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm44374-201ENSMUST00000199821 140 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm18600-201ENSMUST00000207205 505 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm9535-201ENSMUST00000218499 768 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx3P48381 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm29486-201ENSMUST00000088648 372 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.53□□□□□ -1.52
Rfx3P48381 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Rfx3P48381 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx3P48381 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rfx3P48381 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx3P48381 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rfx3P48381 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm25415-201ENSMUST00000104220 132 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm25564-201ENSMUST00000104604 132 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx3P48381 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx3P48381 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm11799-201ENSMUST00000116110 460 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm13193-201ENSMUST00000117275 225 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm14998-201ENSMUST00000120502 495 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm13669-201ENSMUST00000122366 457 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
Rfx3P48381 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Rfx3P48381 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm18808-201ENSMUST00000173316 462 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx3P48381 Mir6989-201ENSMUST00000184812 65 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm7626-201ENSMUST00000195801 353 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx3P48381 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm6009-201ENSMUST00000210848 280 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx3P48381 Gm9237-201ENSMUST00000221499 548 ntBASIC5.52□□□□□ -1.53
Rfx3P48381 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms