Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm42598-201ENSMUST00000200110 2437 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm7831-201ENSMUST00000117990 552 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm13163-201ENSMUST00000119875 336 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm24198-201ENSMUST00000157812 108 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm17047-201ENSMUST00000167709 430 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm20797-201ENSMUST00000177894 383 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm27617-201ENSMUST00000184321 168 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm29073-201ENSMUST00000185563 664 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm29165-201ENSMUST00000190655 664 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm29211-201ENSMUST00000191470 664 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm7496-201ENSMUST00000192573 1034 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm43383-201ENSMUST00000195981 469 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm35212-201ENSMUST00000196672 606 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm43005-201ENSMUST00000199015 648 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm43228-201ENSMUST00000200735 264 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm42558-201ENSMUST00000200982 265 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm30694-201ENSMUST00000209278 1230 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm19572-201ENSMUST00000214326 338 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Rfx1P48377 n-R5s196-201ENSMUST00000083136 117 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Rfx1P48377 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Gm44102-201ENSMUST00000204031 1666 ntBASIC8.08□□□□□ -1.12
Rfx1P48377 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rfx1P48377 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Mir708-201ENSMUST00000102189 109 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
Rfx1P48377 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rfx1P48377 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC8.07□□□□□ -1.12
Rfx1P48377 Gm12321-201ENSMUST00000121485 804 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms