Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm22867-201ENSMUST00000157499 109 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm22895-201ENSMUST00000157508 308 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm24081-201ENSMUST00000175177 125 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm29596-201ENSMUST00000185710 385 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm8506-201ENSMUST00000186661 829 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm7825-201ENSMUST00000204046 416 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm8039-201ENSMUST00000204758 712 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm2225-201ENSMUST00000209570 377 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm7557-201ENSMUST00000221935 865 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.38□□□□□ -1.39
Cxcl12P40224 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cxcl12P40224 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
Cxcl12P40224 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cxcl12P40224 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cxcl12P40224 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.38□□□□□ -1.39
Cxcl12P40224 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm13604-201ENSMUST00000119332 482 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm12399-201ENSMUST00000121475 446 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm13738-201ENSMUST00000122437 469 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm22492-201ENSMUST00000157192 297 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.37□□□□□ -1.39
Cxcl12P40224 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm5080-201ENSMUST00000220341 743 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm6049-201ENSMUST00000222369 458 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 CT571245.1-201ENSMUST00000218642 3465 ntBASIC6.37□□□□□ -1.39
Cxcl12P40224 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cxcl12P40224 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cxcl12P40224 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.36□□□□□ -1.39
Cxcl12P40224 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cxcl12P40224 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Cxcl12P40224 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cxcl12P40224 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cxcl12P40224 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cxcl12P40224 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.36□□□□□ -1.39
Cxcl12P40224 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.36□□□□□ -1.39
Cxcl12P40224 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cxcl12P40224 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms