Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.05□□□□□ -1.6
Col8a2P25318 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.05□□□□□ -1.6
Col8a2P25318 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col8a2P25318 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col8a2P25318 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col8a2P25318 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.05□□□□□ -1.6
Col8a2P25318 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col8a2P25318 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col8a2P25318 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col8a2P25318 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Col8a2P25318 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Col8a2P25318 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm24886-201ENSMUST00000104384 123 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm25345-201ENSMUST00000104505 133 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm12193-201ENSMUST00000117250 379 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm14842-201ENSMUST00000119577 269 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm7189-201ENSMUST00000119811 429 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm14212-201ENSMUST00000122023 826 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm22210-201ENSMUST00000158101 144 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm23757-201ENSMUST00000158353 100 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm25363-201ENSMUST00000158850 245 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm27219-201ENSMUST00000184633 742 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm18407-201ENSMUST00000192126 790 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm34768-201ENSMUST00000193884 565 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm45734-201ENSMUST00000211916 411 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.04□□□□□ -1.6
Col8a2P25318 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.04□□□□□ -1.6
Col8a2P25318 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 AC172989.1-201ENSMUST00000226387 513 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.04□□□□□ -1.6
Col8a2P25318 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col8a2P25318 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col8a2P25318 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a2P25318 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a2P25318 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col8a2P25318 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a2P25318 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Col8a2P25318 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a2P25318 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col8a2P25318 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms