Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm10936-201ENSMUST00000105264 252 ntBASIC5.45□□□□□ -1.54
P20040 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Gm15765-201ENSMUST00000118407 910 ntBASIC5.45□□□□□ -1.54
P20040 Gm12565-201ENSMUST00000119004 649 ntBASIC5.45□□□□□ -1.54
P20040 Gm16511-201ENSMUST00000120019 564 ntBASIC5.45□□□□□ -1.54
P20040 Gm15181-201ENSMUST00000120142 177 ntBASIC5.45□□□□□ -1.54
P20040 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.45□□□□□ -1.54
P20040 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.45□□□□□ -1.54
P20040 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.45□□□□□ -1.54
P20040 Gm23343-201ENSMUST00000158964 143 ntBASIC5.45□□□□□ -1.54
P20040 Gm16112-201ENSMUST00000159075 382 ntBASIC5.45□□□□□ -1.54
P20040 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.45□□□□□ -1.54
P20040 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.45□□□□□ -1.54
P20040 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.45□□□□□ -1.54
P20040 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.45□□□□□ -1.54
P20040 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.45□□□□□ -1.54
P20040 Gm37191-201ENSMUST00000193346 388 ntBASIC5.45□□□□□ -1.54
P20040 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
P20040 Gm29778-201ENSMUST00000201667 466 ntBASIC5.45□□□□□ -1.54
P20040 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.45□□□□□ -1.54
P20040 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.45□□□□□ -1.54
P20040 Gm9535-201ENSMUST00000218499 768 ntBASIC5.45□□□□□ -1.54
P20040 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.45□□□□□ -1.54
P20040 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.45□□□□□ -1.54
P20040 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.45□□□□□ -1.54
P20040 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.45□□□□□ -1.54
P20040 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
P20040 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.45□□□□□ -1.54
P20040 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
P20040 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.45□□□□□ -1.54
P20040 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
P20040 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.45□□□□□ -1.54
P20040 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
P20040 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.44□□□□□ -1.54
P20040 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
P20040 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.44□□□□□ -1.54
P20040 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.44□□□□□ -1.54
P20040 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
P20040 Gm14018-201ENSMUST00000119042 455 ntBASIC5.44□□□□□ -1.54
P20040 Gm7700-201ENSMUST00000120273 970 ntBASIC5.44□□□□□ -1.54
P20040 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.44□□□□□ -1.54
P20040 Gm13024-201ENSMUST00000121756 718 ntBASIC5.44□□□□□ -1.54
P20040 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
P20040 Mir1900-201ENSMUST00000122714 78 ntBASIC5.44□□□□□ -1.54
P20040 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.44□□□□□ -1.54
P20040 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
P20040 Gm22701-201ENSMUST00000175371 291 ntBASIC5.44□□□□□ -1.54
P20040 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.44□□□□□ -1.54
P20040 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
P20040 Gm8009-201ENSMUST00000191672 436 ntBASIC5.44□□□□□ -1.54
P20040 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.44□□□□□ -1.54
P20040 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.44□□□□□ -1.54
P20040 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.44□□□□□ -1.54
P20040 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.44□□□□□ -1.54
P20040 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.44□□□□□ -1.54
P20040 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Gm8637-201ENSMUST00000212919 1085 ntBASIC5.44□□□□□ -1.54
P20040 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.44□□□□□ -1.54
P20040 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.44□□□□□ -1.54
P20040 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.44□□□□□ -1.54
P20040 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
P20040 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
P20040 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P20040 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.43□□□□□ -1.54
P20040 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
P20040 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.43□□□□□ -1.54
P20040 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms