Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23620-201ENSMUST00000116812 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm25042-201ENSMUST00000116856 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm25540-201ENSMUST00000116880 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm13771-201ENSMUST00000117988 238 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm13900-201ENSMUST00000119402 498 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm13163-201ENSMUST00000119875 336 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm11990-201ENSMUST00000121505 897 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm15152-201ENSMUST00000121540 394 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm21999-201ENSMUST00000165985 387 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm23550-201ENSMUST00000179003 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm25123-201ENSMUST00000179154 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm25353-201ENSMUST00000179366 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm22992-201ENSMUST00000179496 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm25892-201ENSMUST00000179867 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm24092-201ENSMUST00000180257 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm19480-201ENSMUST00000185547 667 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm29168-201ENSMUST00000189953 687 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm2367-201ENSMUST00000192374 472 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm6236-201ENSMUST00000193785 1009 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm42983-201ENSMUST00000199879 815 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm3549-201ENSMUST00000203873 794 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sdc1P18828 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 CT030645.3-201ENSMUST00000225483 1022 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 CT030238.4-202ENSMUST00000226143 745 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sdc1P18828 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm42685-201ENSMUST00000200378 2390 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Sdc1P18828 Ap5m1-208ENSMUST00000228238 3514 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm26300-201ENSMUST00000102282 94 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sdc1P18828 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm23484-201ENSMUST00000104178 131 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm26419-201ENSMUST00000104272 133 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sdc1P18828 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Sdc1P18828 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm15016-201ENSMUST00000117300 720 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm14630-201ENSMUST00000118057 246 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm11865-201ENSMUST00000118093 859 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm12099-201ENSMUST00000118660 750 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm11447-201ENSMUST00000118983 858 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm11227-201ENSMUST00000119774 471 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm15153-201ENSMUST00000119867 274 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm12399-201ENSMUST00000121475 446 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm12499-201ENSMUST00000121961 546 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm12929-201ENSMUST00000122406 370 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Sdc1P18828 Gm14349-201ENSMUST00000137155 902 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm24477-201ENSMUST00000157438 103 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm23220-201ENSMUST00000158115 137 ntBASIC4.89□□□□□ -1.63
Sdc1P18828 Gm24883-201ENSMUST00000158391 281 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms