Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm6654-201ENSMUST00000118950 348 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm13222-201ENSMUST00000119638 138 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm14300-201ENSMUST00000120800 946 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm15152-201ENSMUST00000121540 394 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm7289-201ENSMUST00000168993 734 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm20530-201ENSMUST00000174261 254 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm24812-201ENSMUST00000175315 284 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Mir7046-201ENSMUST00000183435 66 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm18802-201ENSMUST00000186270 888 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm28918-201ENSMUST00000188822 699 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm42708-201ENSMUST00000196332 905 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm42824-201ENSMUST00000199361 247 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm9293-201ENSMUST00000223096 306 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Cdx1P18111 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Mir106b-201ENSMUST00000083580 82 ntBASIC5.09□□□□□ -1.59
Cdx1P18111 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdx1P18111 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdx1P18111 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx1P18111 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
Cdx1P18111 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx1P18111 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx1P18111 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx1P18111 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdx1P18111 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Cdx1P18111 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm2178-201ENSMUST00000104927 357 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdx1P18111 Mir466i-201ENSMUST00000116924 121 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm12369-201ENSMUST00000121343 942 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 BC064078-201ENSMUST00000122939 570 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdx1P18111 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm24685-201ENSMUST00000157764 285 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm24186-201ENSMUST00000157983 127 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx1P18111 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdx1P18111 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdx1P18111 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdx1P18111 Gm29663-201ENSMUST00000186962 853 ntBASIC5.08□□□□□ -1.6
Cdx1P18111 Gm29161-201ENSMUST00000188250 699 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms