Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.19□□□□□ -1.42
Lire1P11260 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Lire1P11260 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.18□□□□□ -1.42
Lire1P11260 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lire1P11260 Gm2178-201ENSMUST00000104927 357 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Lire1P11260 Gm11501-201ENSMUST00000118039 581 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.18□□□□□ -1.42
Lire1P11260 Mir1929-201ENSMUST00000158635 93 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lire1P11260 Gm28567-201ENSMUST00000190270 693 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm36638-201ENSMUST00000193295 400 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm37044-201ENSMUST00000193531 693 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm38369-201ENSMUST00000195101 693 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm18430-201ENSMUST00000197534 682 ntBASIC6.18□□□□□ -1.42
Lire1P11260 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.18□□□□□ -1.42
Lire1P11260 AV026068-237ENSMUST00000226075 572 ntBASIC6.18□□□□□ -1.42
Lire1P11260 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lire1P11260 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.18□□□□□ -1.42
Lire1P11260 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Lire1P11260 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lire1P11260 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lire1P11260 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Lire1P11260 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Lire1P11260 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.18□□□□□ -1.42
Lire1P11260 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Lire1P11260 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.17□□□□□ -1.42
Lire1P11260 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Gm22284-201ENSMUST00000104132 132 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm23768-201ENSMUST00000104440 131 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lire1P11260 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm9427-201ENSMUST00000116187 651 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm15216-201ENSMUST00000118058 277 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm3757-201ENSMUST00000125878 675 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm4152-201ENSMUST00000172675 259 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm20454-201ENSMUST00000172713 221 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.17□□□□□ -1.42
Lire1P11260 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.17□□□□□ -1.42
Lire1P11260 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms