Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Mir7685-201ENSMUST00000183555 62 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.65□□□□□ -1.35
Chmp6P0C0A3 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm22374-201ENSMUST00000104583 132 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm13702-201ENSMUST00000118542 825 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm25219-201ENSMUST00000157545 330 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Chmp6P0C0A3 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm13193-201ENSMUST00000117275 225 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm9005-201ENSMUST00000119908 607 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm27158-201ENSMUST00000183813 238 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Mir6989-201ENSMUST00000184812 65 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm5334-201ENSMUST00000187472 720 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm19087-201ENSMUST00000191430 946 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm8009-201ENSMUST00000191672 436 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm37265-201ENSMUST00000191698 885 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm8860-201ENSMUST00000193160 445 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Chmp6P0C0A3 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.63□□□□□ -1.35
Chmp6P0C0A3 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms