Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm22613-201ENSMUST00000122679 292 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm18591-201ENSMUST00000220568 763 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 AC129085.2-201ENSMUST00000223763 2800 ntBASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a3E9PWQ3 Gm45221-201ENSMUST00000207822 2272 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm12755-201ENSMUST00000122297 282 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm25665-201ENSMUST00000157695 110 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm28973-201ENSMUST00000189310 613 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm43973-201ENSMUST00000203562 210 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm10764-202ENSMUST00000220397 2335 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm42972-201ENSMUST00000196937 5617 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm11510-201ENSMUST00000120278 347 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Mir1932-201ENSMUST00000157390 90 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm38046-201ENSMUST00000192733 550 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm7557-201ENSMUST00000221935 865 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm12402-201ENSMUST00000120536 334 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm23906-201ENSMUST00000157573 128 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm24961-201ENSMUST00000157918 184 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Gm18924-201ENSMUST00000211929 316 ntBASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a3E9PWQ3 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Mir6960-201ENSMUST00000183449 61 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm28683-201ENSMUST00000187134 615 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm3145-201ENSMUST00000188584 220 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm28840-205ENSMUST00000189320 615 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm28835-203ENSMUST00000190062 615 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm7688-201ENSMUST00000212857 337 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col6a3E9PWQ3 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms