Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm5073-201ENSMUST00000118222 820 ntBASIC5.15□□□□□ -1.58
Col6a4A2AX52 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.15□□□□□ -1.58
Col6a4A2AX52 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm23149-201ENSMUST00000158837 230 ntBASIC5.15□□□□□ -1.58
Col6a4A2AX52 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm29778-201ENSMUST00000201667 466 ntBASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.15□□□□□ -1.58
Col6a4A2AX52 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.15□□□□□ -1.58
Col6a4A2AX52 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.15□□□□□ -1.58
Col6a4A2AX52 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.15□□□□□ -1.58
Col6a4A2AX52 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm37940-201ENSMUST00000194243 3251 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm25345-201ENSMUST00000104505 133 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm23280-201ENSMUST00000157905 139 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm26357-201ENSMUST00000158218 115 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm18325-201ENSMUST00000203228 835 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm10064-201ENSMUST00000071235 399 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm18259-201ENSMUST00000220991 2010 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.15□□□□□ -1.59
Col6a4A2AX52 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a4A2AX52 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Grik1-210ENSMUST00000228034 2708 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm14115-201ENSMUST00000119242 482 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm22552-201ENSMUST00000157796 337 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm17086-201ENSMUST00000171346 484 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm26731-201ENSMUST00000180683 543 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm45596-201ENSMUST00000209279 434 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm18996-201ENSMUST00000214851 755 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm2614-201ENSMUST00000223227 403 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm24525-201ENSMUST00000082917 151 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm13930-201ENSMUST00000118569 368 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm18343-201ENSMUST00000172802 604 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm27543-201ENSMUST00000183562 177 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm9517-201ENSMUST00000195021 874 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm7832-201ENSMUST00000202613 880 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm30694-201ENSMUST00000209278 1230 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Gm5119-201ENSMUST00000215858 634 ntBASIC5.14□□□□□ -1.59
Col6a4A2AX52 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms