Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Mir7033-201ENSMUST00000184259 81 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Mir8105-201ENSMUST00000184718 89 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm37641-201ENSMUST00000193837 239 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm17895-201ENSMUST00000194028 874 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm43383-201ENSMUST00000195981 469 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm44392-201ENSMUST00000196758 115 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm44411-201ENSMUST00000204172 349 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm18012-201ENSMUST00000204558 773 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC123835.1-201ENSMUST00000214362 670 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC159476.2-201ENSMUST00000216221 418 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC116589.9-201ENSMUST00000221462 908 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm2754-201ENSMUST00000223383 589 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC131117.2-202ENSMUST00000224539 547 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
H2afb3S4R1G7 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Mir688-201ENSMUST00000102055 75 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Mir706-201ENSMUST00000102262 84 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm11433-201ENSMUST00000118318 228 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm13690-201ENSMUST00000118989 285 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm11483-201ENSMUST00000119839 247 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm12654-201ENSMUST00000120387 587 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm16129-201ENSMUST00000152628 486 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm26486-201ENSMUST00000158021 110 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm18833-201ENSMUST00000173218 862 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm26595-201ENSMUST00000181585 484 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm37380-201ENSMUST00000193752 397 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm18445-201ENSMUST00000195502 774 ntBASIC5.75□□□□□ -1.49
H2afb3S4R1G7 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb3S4R1G7 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms