Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm37189-201ENSMUST00000192131 298 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm8863-201ENSMUST00000216630 926 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm22581-201ENSMUST00000083735 136 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn3Q9Z0G9 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm14294-201ENSMUST00000119749 751 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm14331-201ENSMUST00000120396 409 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm23553-201ENSMUST00000157817 295 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm18290-201ENSMUST00000202900 844 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm5318-201ENSMUST00000205249 406 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm3266-201ENSMUST00000217832 591 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm18955-201ENSMUST00000223173 649 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm2614-201ENSMUST00000223227 403 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cldn3Q9Z0G9 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Snora35-201ENSMUST00000104579 128 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm23954-201ENSMUST00000157213 353 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm22569-201ENSMUST00000175545 124 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Cldn3Q9Z0G9 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms