Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm24069-201ENSMUST00000104512 127 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm15765-201ENSMUST00000118407 910 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm9506-201ENSMUST00000118516 320 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm11617-201ENSMUST00000119609 639 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm37376-201ENSMUST00000192176 453 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm37511-201ENSMUST00000192901 294 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm9535-201ENSMUST00000218499 768 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm9321-201ENSMUST00000221179 778 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm15732-201ENSMUST00000079794 480 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim3Q9R1R2 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm11271-201ENSMUST00000116054 440 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm7058-201ENSMUST00000119209 902 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm6977-201ENSMUST00000121568 512 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mir1900-201ENSMUST00000122714 78 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm16112-201ENSMUST00000159075 382 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm24465-201ENSMUST00000178398 107 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm26557-201ENSMUST00000180756 493 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm28973-201ENSMUST00000189310 613 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm37103-201ENSMUST00000191830 115 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm8920-201ENSMUST00000196153 924 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm43850-201ENSMUST00000202021 578 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm44243-201ENSMUST00000204323 692 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.84□□□□□ -1.47
Trim3Q9R1R2 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms