Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm11799-201ENSMUST00000116110 460 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm15901-201ENSMUST00000117663 941 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm8692-201ENSMUST00000118102 438 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm7212-201ENSMUST00000120817 348 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm15502-201ENSMUST00000121449 208 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm25374-201ENSMUST00000158158 101 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm16297-201ENSMUST00000161466 459 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm43743-202ENSMUST00000198353 491 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm43203-201ENSMUST00000200130 558 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm7554-201ENSMUST00000202282 574 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Mir412-201ENSMUST00000083636 80 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lima1Q9ERG0 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm12375-201ENSMUST00000119331 921 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm14489-201ENSMUST00000120868 901 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm6264-201ENSMUST00000160802 624 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.96□□□□□ -1.46
Lima1Q9ERG0 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Lima1Q9ERG0 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms