Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm18700-201ENSMUST00000185791 553 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm8920-201ENSMUST00000196153 924 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm7499-201ENSMUST00000210423 813 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm6436-201ENSMUST00000077163 451 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Snora35-201ENSMUST00000104579 128 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm29160-201ENSMUST00000190094 699 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm3351-201ENSMUST00000193454 505 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm44361-201ENSMUST00000197960 94 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm4548-201ENSMUST00000208487 509 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Gm45734-201ENSMUST00000211916 411 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Smc1aQ9CU62 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Smc1aQ9CU62 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm26079-201ENSMUST00000104066 133 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm6446-201ENSMUST00000120604 818 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm26023-201ENSMUST00000122722 313 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm26162-201ENSMUST00000157793 132 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm20691-201ENSMUST00000176889 333 ntBASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Smc1aQ9CU62 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms