Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm25919-201ENSMUST00000104271 132 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm26146-201ENSMUST00000104478 185 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm26037-201ENSMUST00000158150 311 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Scarna6-201ENSMUST00000158656 265 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37784-201ENSMUST00000193233 189 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm36448-201ENSMUST00000199916 438 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm18838-201ENSMUST00000204855 886 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm9535-201ENSMUST00000218499 768 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm15732-201ENSMUST00000079794 480 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm24048-201ENSMUST00000102411 106 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm11852-201ENSMUST00000120806 222 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm7931-201ENSMUST00000121537 271 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm19560-201ENSMUST00000177510 514 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm5947-201ENSMUST00000179156 714 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm5645-201ENSMUST00000179597 714 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm3650-201ENSMUST00000180600 747 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm27355-201ENSMUST00000185045 128 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm28195-201ENSMUST00000186992 372 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm44705-201ENSMUST00000206719 339 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 Gm33601-201ENSMUST00000210001 961 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.47□□□□□ -1.53
Scrt1Q99M85 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Scrt1Q99M85 AC173482.3-201ENSMUST00000225492 1212 ntBASIC5.47□□□□□ -1.53
Scrt1Q99M85 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms