Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm13877-201ENSMUST00000120614 417 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm11689-201ENSMUST00000120766 302 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm15596-201ENSMUST00000121139 784 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm13808-201ENSMUST00000121353 184 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm17149-201ENSMUST00000164712 375 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm17655-201ENSMUST00000167969 255 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm25617-201ENSMUST00000179548 133 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Mir6908-201ENSMUST00000184056 63 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm27185-201ENSMUST00000184296 247 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Mir6398-201ENSMUST00000184541 102 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm37526-201ENSMUST00000194640 619 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm25617-202ENSMUST00000198387 132 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm17849-201ENSMUST00000219788 853 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 AC126673.2-201ENSMUST00000221052 686 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Snord88a-201ENSMUST00000116723 90 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm13141-201ENSMUST00000117417 456 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm13739-201ENSMUST00000118020 530 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm13265-201ENSMUST00000118090 421 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm15149-201ENSMUST00000119370 360 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm13444-201ENSMUST00000119445 522 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm13118-201ENSMUST00000120402 549 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm15349-201ENSMUST00000121154 204 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm24768-201ENSMUST00000158512 94 ntBASIC6.26□□□□□ -1.41
Clrn1Q8K445 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Clrn1Q8K445 Gm22392-201ENSMUST00000177971 107 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms