Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Snord65-201ENSMUST00000104269 72 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm12447-201ENSMUST00000119110 470 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm16016-201ENSMUST00000120831 550 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm2986-201ENSMUST00000121603 382 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm23426-201ENSMUST00000122483 318 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm26486-201ENSMUST00000158021 110 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm27152-201ENSMUST00000183828 99 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm27507-201ENSMUST00000184199 93 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm37493-201ENSMUST00000193167 433 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm37177-201ENSMUST00000193768 417 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm22897-202ENSMUST00000197782 127 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm28392-201ENSMUST00000077630 393 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.56□□□□□ -1.36
CopaQ8CIE6 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CopaQ8CIE6 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm11271-201ENSMUST00000116054 440 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm12372-201ENSMUST00000121654 768 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm25550-201ENSMUST00000158079 128 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm20691-201ENSMUST00000176889 333 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm43033-201ENSMUST00000199682 425 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm44162-201ENSMUST00000203543 544 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm5324-201ENSMUST00000208115 476 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm22684-201ENSMUST00000082849 132 ntBASIC6.55□□□□□ -1.36
CopaQ8CIE6 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CopaQ8CIE6 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms