Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm15801-201ENSMUST00000120920 522 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm8783-201ENSMUST00000159764 522 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm27158-201ENSMUST00000183813 238 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm8863-201ENSMUST00000216630 926 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm5582-201ENSMUST00000075251 522 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.3□□□□□ -1.4
Ccdc28aQ8CEI3 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm25396-201ENSMUST00000103981 133 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm22714-201ENSMUST00000116894 78 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm13991-201ENSMUST00000120190 648 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm12308-201ENSMUST00000120440 389 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm31711-201ENSMUST00000220687 196 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm23624-201ENSMUST00000082463 321 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms