Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm25785-201ENSMUST00000104129 125 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm22103-201ENSMUST00000116733 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm26475-201ENSMUST00000116769 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm23620-201ENSMUST00000116812 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm25042-201ENSMUST00000116856 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm25540-201ENSMUST00000116880 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm23884-201ENSMUST00000122687 294 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm23550-201ENSMUST00000179003 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm25123-201ENSMUST00000179154 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm25353-201ENSMUST00000179366 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm22992-201ENSMUST00000179496 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm25892-201ENSMUST00000179867 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm24092-201ENSMUST00000180257 121 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm18698-201ENSMUST00000192327 668 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm37770-201ENSMUST00000192855 772 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm19764-201ENSMUST00000203630 649 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ccdc40Q8BI79 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm13357-201ENSMUST00000120528 537 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm12804-201ENSMUST00000121030 999 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm13642-201ENSMUST00000121697 381 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm16260-201ENSMUST00000155141 304 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm22361-201ENSMUST00000158435 176 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm27853-201ENSMUST00000184176 250 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm19124-201ENSMUST00000191041 832 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm8290-201ENSMUST00000218202 477 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm9535-201ENSMUST00000218499 768 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Olfr687-201ENSMUST00000098154 938 ntBASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc40Q8BI79 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms