Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm18330-201ENSMUST00000199246 547 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm43116-201ENSMUST00000199789 195 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm20177-201ENSMUST00000203705 334 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm6009-201ENSMUST00000210848 280 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp49Q6P9L4 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm13811-201ENSMUST00000117800 256 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm13642-201ENSMUST00000121697 381 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm15530-201ENSMUST00000122206 555 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm5334-201ENSMUST00000187472 720 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm28080-201ENSMUST00000188552 722 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm21524-201ENSMUST00000190499 696 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm21715-201ENSMUST00000191056 694 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm17934-201ENSMUST00000192818 422 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm37774-201ENSMUST00000194401 245 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm19212-201ENSMUST00000216642 862 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.9□□□□□ -1.3
Usp49Q6P9L4 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp49Q6P9L4 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.9□□□□□ -1.31
Usp49Q6P9L4 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.9□□□□□ -1.31
Usp49Q6P9L4 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp49Q6P9L4 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms