Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.55□□□□□ -1.36
Upf3bQ3ULL6 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Mir1900-201ENSMUST00000122714 78 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm23954-201ENSMUST00000157213 353 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Mir7685-201ENSMUST00000183555 62 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm28195-201ENSMUST00000186992 372 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm8009-201ENSMUST00000191672 436 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm37177-201ENSMUST00000193768 417 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm2602-201ENSMUST00000202112 571 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm4548-201ENSMUST00000208487 509 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm7570-201ENSMUST00000215246 698 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm6990-201ENSMUST00000086830 348 ntBASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Upf3bQ3ULL6 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm23311-201ENSMUST00000104152 134 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm28080-201ENSMUST00000188552 722 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm21524-201ENSMUST00000190499 696 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm21715-201ENSMUST00000191056 694 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm5318-201ENSMUST00000205249 406 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm3785-201ENSMUST00000221000 202 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 Gm10095-201ENSMUST00000222765 483 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.53□□□□□ -1.36
Upf3bQ3ULL6 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms