Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm12152-201ENSMUST00000122465 684 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm25117-201ENSMUST00000157194 144 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm4845-201ENSMUST00000179202 562 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm5260-201ENSMUST00000186157 949 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm5306-201ENSMUST00000203325 757 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm45473-201ENSMUST00000211452 616 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.1□□□□□ -1.43
Trafd1Q3UDK1 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm24272-201ENSMUST00000102329 98 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm14349-201ENSMUST00000137155 902 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm2602-201ENSMUST00000202112 571 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Gm38574-201ENSMUST00000211855 640 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.09□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms