Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm23757-201ENSMUST00000158353 100 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm27512-201ENSMUST00000175328 126 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm35013-201ENSMUST00000197218 832 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm43243-201ENSMUST00000199964 278 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm9685-201ENSMUST00000211275 538 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm10095-201ENSMUST00000222765 483 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ctdnep1Q3TP92 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm13770-201ENSMUST00000117149 305 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm15618-201ENSMUST00000121610 452 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm24179-201ENSMUST00000158925 127 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm20480-201ENSMUST00000173953 250 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm5244-202ENSMUST00000189517 743 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm44382-201ENSMUST00000198683 122 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ctdnep1Q3TP92 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm22231-201ENSMUST00000101027 73 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm13531-201ENSMUST00000121893 543 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm15840-201ENSMUST00000122099 943 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm9671-201ENSMUST00000171502 547 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Mir6992-201ENSMUST00000183342 109 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm2602-201ENSMUST00000202112 571 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm44219-201ENSMUST00000203005 273 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ctdnep1Q3TP92 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms