Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.95□□□□□ -1.3
Sox9Q04887 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox9Q04887 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.95□□□□□ -1.3
Sox9Q04887 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 Gm18805-201ENSMUST00000206872 655 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.95□□□□□ -1.3
Sox9Q04887 Gm45750-201ENSMUST00000211966 354 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 Gm7688-201ENSMUST00000212857 337 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 AL929265.1-201ENSMUST00000213427 125 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox9Q04887 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox9Q04887 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Sox9Q04887 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Sox9Q04887 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Sox9Q04887 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Sox9Q04887 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Sox9Q04887 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.95□□□□□ -1.3
Sox9Q04887 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Sox9Q04887 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Sox9Q04887 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.95□□□□□ -1.3
Sox9Q04887 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.94□□□□□ -1.3
Sox9Q04887 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.94□□□□□ -1.3
Sox9Q04887 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm20432-201ENSMUST00000173716 250 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm16456-201ENSMUST00000174431 920 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm7745-201ENSMUST00000182235 973 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm27152-201ENSMUST00000183828 99 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Sox9Q04887 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm37070-201ENSMUST00000193272 460 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm43104-201ENSMUST00000197234 311 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm44361-201ENSMUST00000197960 94 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox9Q04887 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.94□□□□□ -1.3
Sox9Q04887 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox9Q04887 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox9Q04887 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox9Q04887 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Sox9Q04887 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.94□□□□□ -1.3
Sox9Q04887 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Sox9Q04887 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Sox9Q04887 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 176.8 ms