Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm20486-201ENSMUST00000101544 128 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm12193-201ENSMUST00000117250 379 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm13641-201ENSMUST00000117993 473 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm11976-201ENSMUST00000119236 295 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm13604-201ENSMUST00000119332 482 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm24065-201ENSMUST00000157487 264 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Mir7020-201ENSMUST00000183787 70 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm27219-201ENSMUST00000184633 742 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm29160-201ENSMUST00000190094 699 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm2225-201ENSMUST00000209570 377 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm10095-201ENSMUST00000222765 483 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm5341-201ENSMUST00000058881 489 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm25515-201ENSMUST00000083858 157 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.39□□□□□ -1.55
Nkx3-1P97436 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nkx3-1P97436 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Mir3097-201ENSMUST00000175356 67 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Mir6337-201ENSMUST00000184194 105 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm37203-201ENSMUST00000191618 385 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm9788-201ENSMUST00000057038 906 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Gm28392-201ENSMUST00000077630 393 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Snora44-201ENSMUST00000082670 129 ntBASIC5.38□□□□□ -1.55
Nkx3-1P97436 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nkx3-1P97436 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms