Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.09□□□□□ -1.43
Fdft1P53798 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.09□□□□□ -1.43
Fdft1P53798 Gm14747-201ENSMUST00000149888 984 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Gm26162-201ENSMUST00000157793 132 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.09□□□□□ -1.43
Fdft1P53798 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Gm43849-201ENSMUST00000201086 215 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Gm44837-201ENSMUST00000206863 717 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Fdft1P53798 Gm45448-201ENSMUST00000211739 209 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.09□□□□□ -1.43
Fdft1P53798 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.09□□□□□ -1.43
Fdft1P53798 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Glycam1-204ENSMUST00000228895 641 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Fdft1P53798 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Fdft1P53798 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Fdft1P53798 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Fdft1P53798 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Fdft1P53798 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Fdft1P53798 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.09□□□□□ -1.43
Fdft1P53798 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Fdft1P53798 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Fdft1P53798 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Fdft1P53798 Naip3-201ENSMUST00000118082 4208 ntBASIC6.09□□□□□ -1.44
Fdft1P53798 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Fdft1P53798 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Fdft1P53798 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Fdft1P53798 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.09□□□□□ -1.44
Fdft1P53798 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.09□□□□□ -1.44
Fdft1P53798 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm11256-201ENSMUST00000118109 829 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.08□□□□□ -1.44
Fdft1P53798 Mir1960-201ENSMUST00000157488 78 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gm26167-201ENSMUST00000158423 253 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gm25904-201ENSMUST00000158491 143 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gm24682-201ENSMUST00000158764 137 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm26557-201ENSMUST00000180756 493 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gm5306-201ENSMUST00000203325 757 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm22300-201ENSMUST00000082661 126 ntBASIC6.08□□□□□ -1.44
Fdft1P53798 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Fdft1P53798 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.08□□□□□ -1.44
Fdft1P53798 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Fdft1P53798 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Fdft1P53798 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Fdft1P53798 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Fdft1P53798 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.07□□□□□ -1.44
Fdft1P53798 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.07□□□□□ -1.44
Fdft1P53798 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Fdft1P53798 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Fdft1P53798 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Fdft1P53798 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.07□□□□□ -1.44
Fdft1P53798 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.07□□□□□ -1.44
Fdft1P53798 Gm12399-201ENSMUST00000121475 446 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms