Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm25916-201ENSMUST00000104263 131 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm11501-201ENSMUST00000118039 581 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm4992-201ENSMUST00000120256 768 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm23259-201ENSMUST00000158318 303 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm6489-201ENSMUST00000178167 696 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm27193-201ENSMUST00000184217 586 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm28871-201ENSMUST00000186191 687 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm9114-201ENSMUST00000188558 997 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm7867-201ENSMUST00000189856 546 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm43744-201ENSMUST00000196387 688 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm4585-201ENSMUST00000207218 452 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm45279-201ENSMUST00000210315 391 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm6009-201ENSMUST00000210848 280 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm45789-201ENSMUST00000213038 364 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 AC123917.1-201ENSMUST00000228063 1048 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Mir106b-201ENSMUST00000083580 82 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.12□□□□□ -1.59
Nkx2-1P50220 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nkx2-1P50220 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm24989-201ENSMUST00000104461 88 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm13193-201ENSMUST00000117275 225 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm6987-201ENSMUST00000119319 428 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm14998-201ENSMUST00000120502 495 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm22226-201ENSMUST00000157355 109 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm18808-201ENSMUST00000173316 462 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm18953-201ENSMUST00000175694 300 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm29496-201ENSMUST00000189854 693 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm44603-201ENSMUST00000206820 367 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Gm9237-201ENSMUST00000221499 548 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.11□□□□□ -1.59
Nkx2-1P50220 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nkx2-1P50220 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms