Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.92□□□□□ -1.3
Usp4P35123 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Usp4P35123 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Usp4P35123 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Usp4P35123 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Snord65-201ENSMUST00000104269 72 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm22710-201ENSMUST00000116892 125 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm8569-201ENSMUST00000117630 647 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm5387-201ENSMUST00000119776 857 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm12096-201ENSMUST00000121149 829 ntBASIC6.91□□□□□ -1.3
Usp4P35123 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Gm25962-201ENSMUST00000157173 168 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Mir1930-201ENSMUST00000158799 84 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp4P35123 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm27156-201ENSMUST00000184589 754 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm9114-201ENSMUST00000188558 997 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm37383-201ENSMUST00000191750 745 ntBASIC6.91□□□□□ -1.3
Usp4P35123 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm17918-201ENSMUST00000205315 574 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp4P35123 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.91□□□□□ -1.3
Usp4P35123 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp4P35123 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm46424-201ENSMUST00000221567 168 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.91□□□□□ -1.3
Usp4P35123 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.91□□□□□ -1.3
Usp4P35123 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.91□□□□□ -1.3
Usp4P35123 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.91□□□□□ -1.3
Usp4P35123 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp4P35123 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp4P35123 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp4P35123 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.91□□□□□ -1.3
Usp4P35123 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Usp4P35123 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp4P35123 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp4P35123 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Usp4P35123 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm13798-201ENSMUST00000118285 139 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm13207-201ENSMUST00000119862 773 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Gm26183-201ENSMUST00000157685 139 ntBASIC6.9□□□□□ -1.3
Usp4P35123 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm27014-201ENSMUST00000182658 937 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm8609-201ENSMUST00000182967 998 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Mir7033-201ENSMUST00000184259 81 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 Gm29156-201ENSMUST00000187764 499 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm43546-201ENSMUST00000196721 943 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm42713-201ENSMUST00000202709 945 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm45136-201ENSMUST00000205793 943 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
Usp4P35123 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp4P35123 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp4P35123 Gm10126-201ENSMUST00000221732 168 ntBASIC6.9□□□□□ -1.3
Usp4P35123 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.9□□□□□ -1.3
Usp4P35123 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.9□□□□□ -1.3
Usp4P35123 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.9□□□□□ -1.3
Usp4P35123 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.9□□□□□ -1.3
Usp4P35123 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms