Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Sdc1P18828 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Sdc1P18828 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Sdc1P18828 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sdc1P18828 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.92□□□□□ -1.62
Sdc1P18828 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Sdc1P18828 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sdc1P18828 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm37725-201ENSMUST00000193965 2125 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm38284-201ENSMUST00000194803 4539 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm23437-201ENSMUST00000104036 127 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm25725-201ENSMUST00000104528 130 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm14510-201ENSMUST00000116165 1092 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm14930-201ENSMUST00000118864 652 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm14267-201ENSMUST00000119751 496 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm12731-201ENSMUST00000120932 268 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm12005-201ENSMUST00000121451 379 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm12322-201ENSMUST00000121605 389 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm11838-201ENSMUST00000121999 231 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.91□□□□□ -1.62
Sdc1P18828 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm24186-201ENSMUST00000157983 127 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Scarna10-201ENSMUST00000158992 325 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm24103-201ENSMUST00000174930 77 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.91□□□□□ -1.62
Sdc1P18828 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm38305-201ENSMUST00000194825 223 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm37358-201ENSMUST00000195492 479 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Gm5853-201ENSMUST00000197183 632 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm5886-202ENSMUST00000203957 522 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC4.91□□□□□ -1.62
Sdc1P18828 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm18955-201ENSMUST00000223173 649 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Sdc1P18828 AC124489.1-201ENSMUST00000225852 526 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 AC129537.1-201ENSMUST00000226596 1228 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 AC122459.3-201ENSMUST00000228508 1042 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gpr87-201ENSMUST00000056898 1080 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm22581-201ENSMUST00000083735 136 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm9874-202ENSMUST00000194957 1464 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Sdc1P18828 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Sdc1P18828 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.91□□□□□ -1.62
Sdc1P18828 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Sdc1P18828 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sdc1P18828 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Sdc1P18828 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Sdc1P18828 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Sdc1P18828 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.9□□□□□ -1.62
Sdc1P18828 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Sdc1P18828 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Sdc1P18828 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.62
Sdc1P18828 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Sdc1P18828 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sdc1P18828 Gm22103-201ENSMUST00000116733 121 ntBASIC4.9□□□□□ -1.63
Sdc1P18828 Gm26475-201ENSMUST00000116769 121 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms