Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm17834-201ENSMUST00000204322 891 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm43905-201ENSMUST00000204516 204 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm2221-201ENSMUST00000209342 418 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm4032-201ENSMUST00000210886 487 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm18255-201ENSMUST00000211316 765 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 AC153847.1-201ENSMUST00000214524 353 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 AC165349.1-201ENSMUST00000217896 424 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm18955-201ENSMUST00000223173 649 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Cdx1P18111 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm5528-201ENSMUST00000076314 480 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Cdx1P18111 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 n-R5s95-201ENSMUST00000082684 118 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Cdx1P18111 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Pramel-201ENSMUST00000118979 1383 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Cdx1P18111 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 AC154522.1-201ENSMUST00000224647 1903 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Cdx1P18111 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdx1P18111 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.11□□□□□ -1.59
Cdx1P18111 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm15310-201ENSMUST00000117891 372 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Zfp389-201ENSMUST00000118425 675 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm11925-201ENSMUST00000121375 535 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm2709-201ENSMUST00000142979 350 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm25556-201ENSMUST00000158077 144 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Mir1929-201ENSMUST00000158635 93 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm24545-201ENSMUST00000158651 85 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm8185-201ENSMUST00000160999 669 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC5.1□□□□□ -1.59
Cdx1P18111 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm17121-201ENSMUST00000170414 847 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Cdx1P18111 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm4956-202ENSMUST00000178869 672 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm17222-201ENSMUST00000180135 847 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm26570-201ENSMUST00000180672 342 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm29160-201ENSMUST00000190094 699 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm43048-201ENSMUST00000196101 388 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm36448-201ENSMUST00000199916 438 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Gm18247-201ENSMUST00000222937 601 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Cdx1P18111 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Cdx1P18111 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.1□□□□□ -1.59
Cdx1P18111 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdx1P18111 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms