Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 CT009480.3-201ENSMUST00000224051 3032 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm13423-201ENSMUST00000117205 888 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm13870-201ENSMUST00000117214 1023 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm15016-201ENSMUST00000117300 720 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm13141-201ENSMUST00000117417 456 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm8430-201ENSMUST00000119780 471 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC4.91□□□□□ -1.62
Hmgb3O54879 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm24130-201ENSMUST00000158536 151 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm4845-201ENSMUST00000179202 562 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm37637-201ENSMUST00000195540 1256 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Ighv8-15-201ENSMUST00000197770 294 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm43108-201ENSMUST00000200525 293 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm44380-201ENSMUST00000203125 293 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm44837-201ENSMUST00000206863 717 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm45042-201ENSMUST00000207377 211 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 AL929555.1-201ENSMUST00000215283 509 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm6885-201ENSMUST00000217261 372 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 AC116502.1-201ENSMUST00000220989 291 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Zfp865-202ENSMUST00000076791 1129 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm6054-201ENSMUST00000078052 378 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm42676-201ENSMUST00000197609 2686 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC4.91□□□□□ -1.62
Hmgb3O54879 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Hmgb3O54879 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 AC140393.3-201ENSMUST00000228396 1352 ntBASIC4.91□□□□□ -1.62
Hmgb3O54879 Gm45413-201ENSMUST00000210389 3538 ntBASIC4.9□□□□□ -1.62
Hmgb3O54879 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hmgb3O54879 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Hmgb3O54879 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hmgb3O54879 AC132852.2-201ENSMUST00000216052 2794 ntBASIC4.9□□□□□ -1.62
Hmgb3O54879 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC4.9□□□□□ -1.62
Hmgb3O54879 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Hmgb3O54879 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hmgb3O54879 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.9□□□□□ -1.62
Hmgb3O54879 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC4.9□□□□□ -1.62
Hmgb3O54879 Gm2178-201ENSMUST00000104927 357 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm14510-201ENSMUST00000116165 1092 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm6884-201ENSMUST00000119318 615 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm13988-201ENSMUST00000119363 288 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm13818-201ENSMUST00000119441 511 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm11726-201ENSMUST00000121028 424 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm11761-201ENSMUST00000121392 445 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm23884-201ENSMUST00000122687 294 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm23894-201ENSMUST00000158107 313 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm19480-201ENSMUST00000185547 667 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm7867-201ENSMUST00000189856 546 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm43048-201ENSMUST00000196101 388 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm44075-201ENSMUST00000204208 216 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm19653-201ENSMUST00000204326 1039 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm18586-201ENSMUST00000217265 518 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm4796-201ENSMUST00000219802 624 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 AC153936.1-201ENSMUST00000219874 395 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 CT010431.1-201ENSMUST00000221249 1080 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 CT030645.2-201ENSMUST00000224321 1012 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 AC151730.1-201ENSMUST00000226106 448 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 AC122397.3-201ENSMUST00000227097 527 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Hmgb3O54879 Gm6436-201ENSMUST00000077163 451 ntBASIC4.9□□□□□ -1.63
Hmgb3O54879 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hmgb3O54879 Mir106b-201ENSMUST00000083580 82 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms