Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm23387-201ENSMUST00000158586 107 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm23287-201ENSMUST00000179427 116 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm23143-201ENSMUST00000180137 116 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm9658-201ENSMUST00000182757 1012 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm27762-201ENSMUST00000183417 109 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm38231-201ENSMUST00000192030 347 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm6321-201ENSMUST00000194460 1090 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm5176-201ENSMUST00000218244 1227 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 CT030645.2-201ENSMUST00000224321 1012 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm25810-201ENSMUST00000082752 108 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Snora21-201ENSMUST00000082967 137 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm24871-201ENSMUST00000083099 116 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm22865-201ENSMUST00000083949 214 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm25099-201ENSMUST00000093716 116 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Rnu5g-201ENSMUST00000093721 116 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm15189-201ENSMUST00000121164 1966 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.2□□□□□ -1.1
NpcdF8VQB8 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm11256-201ENSMUST00000118109 829 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm14795-201ENSMUST00000118461 471 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm14989-201ENSMUST00000120497 207 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm12630-201ENSMUST00000121575 784 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm14380-201ENSMUST00000122298 431 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm15878-201ENSMUST00000127561 306 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm17038-201ENSMUST00000166586 494 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm5456-201ENSMUST00000170706 844 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm17045-201ENSMUST00000178600 844 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm26915-201ENSMUST00000183080 748 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm28353-201ENSMUST00000186482 570 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm28533-201ENSMUST00000186741 570 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm29470-201ENSMUST00000188007 696 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm28620-201ENSMUST00000190463 439 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm4374-201ENSMUST00000204929 424 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm18599-201ENSMUST00000206729 1125 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm18469-201ENSMUST00000208850 439 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.19□□□□□ -1.1
NpcdF8VQB8 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.19□□□□□ -1.1
NpcdF8VQB8 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms