Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.23□□□□□ -1.41
Srp54bE9PXC0 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm22714-201ENSMUST00000116894 78 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm14173-201ENSMUST00000117690 278 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm8317-201ENSMUST00000121261 471 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm27460-201ENSMUST00000184213 100 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm6693-201ENSMUST00000189583 813 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm37103-201ENSMUST00000191830 115 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm8860-201ENSMUST00000193160 445 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm2225-201ENSMUST00000209570 377 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm9292-201ENSMUST00000222008 710 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm5612-201ENSMUST00000053326 375 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm10221-201ENSMUST00000088299 309 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Srp54bE9PXC0 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.21□□□□□ -1.41
Srp54bE9PXC0 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.21□□□□□ -1.41
Srp54bE9PXC0 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
Srp54bE9PXC0 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Srp54bE9PXC0 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.21□□□□□ -1.41
Srp54bE9PXC0 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm25917-201ENSMUST00000104267 130 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Mir1903-201ENSMUST00000122574 80 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm16557-201ENSMUST00000159182 191 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm25065-201ENSMUST00000177914 132 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm25891-201ENSMUST00000180050 132 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm19033-201ENSMUST00000208516 964 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm24454-201ENSMUST00000083349 132 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm26063-201ENSMUST00000083378 107 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.21□□□□□ -1.42
Srp54bE9PXC0 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms