Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim3Q9R1R2 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm11976-201ENSMUST00000119236 295 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm23884-201ENSMUST00000122687 294 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm26037-201ENSMUST00000158150 311 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm37189-201ENSMUST00000192131 298 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm38237-201ENSMUST00000193366 376 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm44163-201ENSMUST00000205140 475 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm7808-201ENSMUST00000082002 387 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm24032-201ENSMUST00000083932 159 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.87□□□□□ -1.47
Trim3Q9R1R2 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm12874-201ENSMUST00000117190 913 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm8312-201ENSMUST00000119380 618 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm13338-201ENSMUST00000120235 361 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm21990-201ENSMUST00000124692 383 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm25374-201ENSMUST00000158158 101 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm23162-201ENSMUST00000175081 121 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm5260-201ENSMUST00000186157 949 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm38291-201ENSMUST00000193671 259 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm44538-201ENSMUST00000205615 348 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.86□□□□□ -1.47
Trim3Q9R1R2 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim3Q9R1R2 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms