Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Mir16-2-201ENSMUST00000083672 95 ntBASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.28□□□□□ -1.24
Trim42Q9D2H5 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Gm42701-201ENSMUST00000196117 1657 ntBASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim42Q9D2H5 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Trim42Q9D2H5 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Trim42Q9D2H5 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Trim42Q9D2H5 Gm19074-201ENSMUST00000218915 1429 ntBASIC7.27□□□□□ -1.24
Trim42Q9D2H5 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
Trim42Q9D2H5 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm23485-201ENSMUST00000104181 155 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm14981-201ENSMUST00000117325 943 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm12131-201ENSMUST00000117479 359 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm7834-201ENSMUST00000117560 437 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm12993-201ENSMUST00000119900 479 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm14712-201ENSMUST00000120195 772 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm12026-201ENSMUST00000120961 1024 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm14749-201ENSMUST00000121269 333 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm6977-201ENSMUST00000121568 512 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm22945-201ENSMUST00000158557 157 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm25839-201ENSMUST00000158921 103 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm17085-201ENSMUST00000165425 502 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm21182-201ENSMUST00000178899 794 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm27538-201ENSMUST00000185065 294 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm38068-201ENSMUST00000192546 540 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm38279-201ENSMUST00000194067 1131 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm43008-201ENSMUST00000202346 286 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm5995-201ENSMUST00000204107 1273 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 AC153975.1-201ENSMUST00000220087 926 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 AC126554.4-201ENSMUST00000221055 409 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 AC150560.3-201ENSMUST00000227442 455 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm26064-201ENSMUST00000083381 109 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm42614-201ENSMUST00000198724 1554 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.27□□□□□ -1.25
Trim42Q9D2H5 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Trim42Q9D2H5 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms