Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Scrt1Q99M85 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.5□□□□□ -1.53
Scrt1Q99M85 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm7146-201ENSMUST00000116079 739 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm13890-201ENSMUST00000117578 390 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm25906-201ENSMUST00000158489 126 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm25445-201ENSMUST00000158996 299 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm20397-201ENSMUST00000174520 362 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm27853-201ENSMUST00000184176 250 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm37609-201ENSMUST00000191778 678 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm37375-201ENSMUST00000193859 387 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm37385-201ENSMUST00000195223 387 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm43798-201ENSMUST00000202056 394 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm44795-201ENSMUST00000205496 319 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm2996-201ENSMUST00000211398 537 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm24454-201ENSMUST00000083349 132 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm9877-201ENSMUST00000064271 2627 ntBASIC5.49□□□□□ -1.53
Scrt1Q99M85 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Scrt1Q99M85 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Scrt1Q99M85 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms