Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm44412-201ENSMUST00000203018 294 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm4548-201ENSMUST00000208487 509 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm9535-201ENSMUST00000218499 768 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm8607-201ENSMUST00000221864 431 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Cstf3Q99LI7 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.07□□□□□ -1.44
Cstf3Q99LI7 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm5793-201ENSMUST00000119393 630 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm15187-201ENSMUST00000122329 264 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm17091-201ENSMUST00000163248 357 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm27601-201ENSMUST00000184794 127 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm18342-201ENSMUST00000186987 694 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm2427-201ENSMUST00000189121 881 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm8860-201ENSMUST00000193160 445 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm8826-201ENSMUST00000193161 948 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Olfr687-201ENSMUST00000098154 938 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cstf3Q99LI7 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.05□□□□□ -1.44
Cstf3Q99LI7 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Gm22604-201ENSMUST00000157604 311 ntBASIC6.05□□□□□ -1.44
Cstf3Q99LI7 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.05□□□□□ -1.44
Cstf3Q99LI7 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cstf3Q99LI7 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms