Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc9Q8VC31 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm22035-201ENSMUST00000157284 228 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm25180-201ENSMUST00000157746 115 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm24057-201ENSMUST00000158616 302 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Mir5100-201ENSMUST00000174993 64 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm38216-201ENSMUST00000194872 1214 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm5314-201ENSMUST00000204852 466 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm45122-201ENSMUST00000206376 784 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 CT025686.1-201ENSMUST00000227592 438 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc9Q8VC31 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 AC123705.3-201ENSMUST00000223531 2069 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm16007-201ENSMUST00000117837 286 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm13265-201ENSMUST00000118090 421 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm13463-201ENSMUST00000119020 233 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm12229-201ENSMUST00000120487 468 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm12583-201ENSMUST00000120677 853 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm15538-201ENSMUST00000121410 313 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm26480-201ENSMUST00000122619 297 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm24781-201ENSMUST00000157636 117 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Mir1945-201ENSMUST00000157919 78 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm22160-201ENSMUST00000158405 328 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm16107-201ENSMUST00000162523 862 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm7244-201ENSMUST00000164658 455 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm9556-201ENSMUST00000182938 940 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm37700-201ENSMUST00000192617 965 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Ighv5-19-201ENSMUST00000193466 297 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm26413-201ENSMUST00000196783 126 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm4605-201ENSMUST00000203148 625 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ccdc9Q8VC31 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms