Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm14515-201ENSMUST00000121327 216 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm13642-201ENSMUST00000121697 381 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm6081-201ENSMUST00000134472 489 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm17121-201ENSMUST00000170414 847 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm18953-201ENSMUST00000175694 300 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm5283-201ENSMUST00000177874 334 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm17222-201ENSMUST00000180135 847 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm27804-201ENSMUST00000185135 119 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm43390-201ENSMUST00000196614 421 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm18805-201ENSMUST00000206872 655 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm18600-201ENSMUST00000207205 505 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm45070-201ENSMUST00000208100 246 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm18601-201ENSMUST00000220831 634 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.19□□□□□ -1.42
Vps39Q8R5L3 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps39Q8R5L3 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm26340-201ENSMUST00000102365 99 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm25877-201ENSMUST00000104326 129 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm11799-201ENSMUST00000116110 460 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm14173-201ENSMUST00000117690 278 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm12442-201ENSMUST00000118372 338 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm12399-201ENSMUST00000121475 446 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm24239-201ENSMUST00000157791 255 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm22698-201ENSMUST00000175375 108 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm37901-201ENSMUST00000195107 514 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm19739-201ENSMUST00000195941 153 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm43354-201ENSMUST00000196862 346 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm9057-201ENSMUST00000198791 296 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm7554-201ENSMUST00000202282 574 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps39Q8R5L3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms