Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm14098-201ENSMUST00000119295 623 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm15275-201ENSMUST00000154752 347 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm17934-201ENSMUST00000192818 422 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm38237-201ENSMUST00000193366 376 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm37758-201ENSMUST00000194275 629 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm37901-201ENSMUST00000195107 514 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm22300-201ENSMUST00000082661 126 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Mir194-1-201ENSMUST00000083647 67 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm22581-201ENSMUST00000083735 136 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim29Q8R2Q0 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm44209-201ENSMUST00000204556 4153 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm25346-201ENSMUST00000104509 128 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm15765-201ENSMUST00000118407 910 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm12654-201ENSMUST00000120387 587 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm13642-201ENSMUST00000121697 381 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm13024-201ENSMUST00000121756 718 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm3544-201ENSMUST00000196129 305 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm7413-201ENSMUST00000219498 462 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Gm42607-201ENSMUST00000200221 3393 ntBASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim29Q8R2Q0 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm38105-201ENSMUST00000192112 2621 ntBASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 AC158595.1-201ENSMUST00000217989 1435 ntBASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm26162-201ENSMUST00000157793 132 ntBASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim29Q8R2Q0 Gm20549-201ENSMUST00000174804 429 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms